TOPAS-Academic - 全谱分析软件
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TOPAS-Academic软件是Bruker-TOPAS软件基础上推出的对教育科研单元的全谱分析软件,用于对X射线衍射(XRD)谱线和对样品晶体结构进行分析。
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介绍
TOPAS - Academic的 V7版此刻已经能够授予学位授予机构,大学、大学治理学院、尝试室和学堂。TOPAS - Academic 了Bruker - axs TOPAS的职能,图形和OpenGL结构编纂器和查看器。启动模式是实现TOPAS的职能。?
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什么是TOPAS-Academic?
TOPAS -Academic是基于Windows XP的(或稍后)通用的非线性推算机系统,由剧本说话驱动。它的重要焦点是结晶学、固态化学和。他的主题是由推算机代数系统封装的幼化例程;它是使主题依赖?槿鏡ietveld细化发光的基础。重要职能:
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函数幼化的推算机代数系统,以及线性/非线性约束的利用。
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一种用于尝试室x射线衍射、同步加快器、单晶体和中子固定波长和TOF数据的全职能Rietveld法式。
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一种仿照退火算法,合用于系统,粉末、中子、中子和单晶数据的现实空间中的结构溶液。
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索引算法。
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叫TC的号令行法式。EXE了TA的内核,用于批处置。
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作用
- 对于在晶体学、固态化学、和职能幼化方面工作的科学家和博士来说,TOPAS -学术性钻研是有关课题。对助教的要求要晶体?,也不应向作者提供讲授辅助。
- 输入到TOPAS -学术-写INP剧本
- Bruker - axs TOPAS的电力用户使用启动模式,数据输入是通过编纂器来编写输入剧本INP体式的。有好的编纂器和援手系统,写INP剧本是直接的。
- 编纂是幼我的选择,进展用户都满足于的要求是不明智的。然而,为了规范INP文件的编纂,并激励使用好的编纂器和编纂macors的编纂器,开源编纂jEdit(凭据GNU通用公共的许可,GNU GPL)被推荐。
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TOPAS-Academic / TOPAS比力
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对于一样的版本号,TA的内核和Bruker - axs TOPAS之间没有区别。TA是新的内核。
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对于单晶细化、结构解决规划、中子TOF和非尺度Rietveld的细化,没有差距。
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在若何处置数据输入若何处置峰值匹配方面有一些分歧。
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对于尺度的Rietveld细化,TOPAS提供了Windows对话框的使用。
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索引是分歧的,但在整体上是的。
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操作系统要求如下:
Version 7 runs 64 bit Windows?
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软件操作界面:
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职能简要概述:
以原子分辨率解析蛋白质
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使用Amazon Web Services进行云推算
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使用Amazon Web Services进行云推算
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PDF天生
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结构查看器
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【英文简介】
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Version 7 of TOPAS-Academic is now available to:
1) Degree-granting institutions comprising universities, university run institutes, laboratories and schools.
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2) Synchrotron and neutron research centers.
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In both cases use is for research purposes and not for commercial clients of the institution. TOPAS-Academic comprises all the functionality of BRUKER-AXS TOPAS operating in Launch mode including all graphics and OpenGL structure editor and viewer. Launch mode is where the full functionality of TOPAS is realized.
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What is TOPAS-Academic?
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TOPAS-Academic is a Windows based general non-linear least squares system driven by a scripting language. Its main focus is in crystallography, solid state chemistry and optimization. At the core of TA is its superb minimization routines wrapped by a computer algebra system; it is this foundation that makes subject dependent modules such as Rietveld refinement shine. The main features include:
Computer algebra system for function minimization and for the application of linear/non-linear constraints.
A fully functional Rietveld program for laboratory x-ray diffraction, synchrotron, single crystal and neutron fixed wavelength and TOF data.
A simulated annealing algorithm for all systems including structure solution in real space from powder, neutron, neutron TOF and single crystal data.
An indexing algorithm.
A command line program called TC.EXE which comprises the Kernel of TA; used for batch processing.
Tutorials describing the functionality of TOPAS-Academic, courtesy of John Evans, can be found here.
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Who is it for?
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TOPAS-Academic is for scientists and PhD students working in the fields of crystallography, solid state chemistry, optimization and function minimization in general. Requests for TA without crystallographic modules or as a teaching aid should be made to the author.
Input to TOPAS-Academic - Writing INP scripts
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TOPAS-Academic/TOPAS comparison?
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There is no difference between the kernel of TA and Bruker-AXS TOPAS for the same version number. TA will always comprise the latest kernel.
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There are no differences in regards to single crystal refinement, structure solution, neutron TOF and non-standard Rietveld refinement.
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There are some differences in how data input is handled for peak fitting as seen in the tutorials .
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For standard Rietveld refinement then TOPAS offers the use of Windows dialogs.
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Indexing is different but on the whole similar - again see the tutorials.
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